Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_103113 | Not Available | Positive | 1944238 - 1944417 | 5737.25 |
| hypothetical protein | SAMN05421757_103114 | Not Available | Positive | 1944590 - 1944970 | 13328.8 |
| hth domain-containing protein | SAMN05421757_103115 | Not Available | Positive | 1944970 - 1945659 | 25770.2 |
| hypothetical protein | SAMN05421757_103116 | Not Available | Positive | 1945755 - 1946954 | 44668.4 |
| malate synthase | SAMN05421757_103117 | Not Available | Positive | 1947185 - 1949386 | 79612.0 |
| uncharacterized conserved protein glcg, duf336 family | SAMN05421757_103118 | Not Available | Positive | 1949533 - 1949964 | 14387.3 |
| putative glutamine amidotransferase | SAMN05421757_103119 | Not Available | Positive | 1950114 - 1950890 | 28098.7 |
| acetyltransferase, gnat family | SAMN05421757_103120 | Not Available | Negative | 1951083 - 1951553 | 17561.8 |
| kynureninase | SAMN05421757_103121 | Not Available | Negative | 1951550 - 1952746 | 43099.9 |
| hypothetical protein | SAMN05421757_103122 | Not Available | Positive | 1952818 - 1953684 | 32065.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
