Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | SAMN05421757_103103 | Not Available | Negative | 1931269 - 1932777 | 55423.0 |
| hypothetical protein | SAMN05421757_103104 | Not Available | Positive | 1933023 - 1933775 | 27569.7 |
| transglycosylase slt domain-containing protein | SAMN05421757_103105 | Not Available | Positive | 1933931 - 1934617 | 24520.3 |
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein | SAMN05421757_103106 | Not Available | Positive | 1934776 - 1935243 | 16708.2 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05421757_103107 | Not Available | Positive | 1935240 - 1935869 | 21060.5 |
| putative hemolysin | SAMN05421757_103108 | Not Available | Negative | 1935889 - 1936764 | 33135.4 |
| aminopeptidase n | SAMN05421757_103109 | Not Available | Negative | 1936927 - 1939500 | 95570.6 |
| hypothetical protein | SAMN05421757_103110 | Not Available | Positive | 1939758 - 1940543 | 28521.0 |
| two component transcriptional regulator, luxr family | SAMN05421757_103111 | Not Available | Negative | 1940586 - 1941212 | 23352.0 |
| hypothetical protein | SAMN05421757_103112 | Not Available | Negative | 1941376 - 1943694 | 85065.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
