Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_10393 | Not Available | Negative | 1922630 - 1923043 | 14748.8 |
| cobaltochelatase cobs subunit | SAMN05421757_10394 | Not Available | Negative | 1923242 - 1924228 | 36593.5 |
| hypothetical protein | SAMN05421757_10395 | Not Available | Positive | 1924317 - 1924943 | 21240.3 |
| hypothetical protein | SAMN05421757_10396 | Not Available | Positive | 1925086 - 1925622 | 19043.6 |
| hypothetical protein | SAMN05421757_10397 | Not Available | Positive | 1925896 - 1926474 | 20105.9 |
| hypothetical protein | SAMN05421757_10398 | Not Available | Positive | 1926570 - 1927055 | 16603.9 |
| dnaj domain-containing protein | SAMN05421757_10399 | Not Available | Negative | 1927102 - 1927731 | 24331.2 |
| bola protein | SAMN05421757_103100 | Not Available | Positive | 1927842 - 1928099 | 9231.84 |
| protein of unknown function | SAMN05421757_103101 | Not Available | Negative | 1928107 - 1928589 | 16119.9 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN05421757_103102 | Not Available | Positive | 1928853 - 1931090 | 78867.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
