Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfotransferase family protein | SAMN05421757_10383 | Not Available | Positive | 1910274 - 1910993 | 27372.3 |
| hypothetical protein | SAMN05421757_10384 | Not Available | Positive | 1911112 - 1911777 | 25835.7 |
| d-lactate dehydrogenase (cytochrome) | SAMN05421757_10385 | Not Available | Negative | 1911789 - 1913165 | 48233.7 |
| chloride channel protein, cic family | SAMN05421757_10386 | Not Available | Positive | 1913480 - 1915168 | 59102.4 |
| hypothetical protein | SAMN05421757_10387 | Not Available | Negative | 1915226 - 1916008 | 27533.7 |
| uncharacterized conserved protein, duf427 family | SAMN05421757_10388 | Not Available | Negative | 1916155 - 1916502 | 12855.2 |
| xaa-pro aminopeptidase | SAMN05421757_10389 | Not Available | Negative | 1916586 - 1918400 | 65501.0 |
| cobaltochelatase cobt subunit | SAMN05421757_10390 | Not Available | Negative | 1918488 - 1920359 | 69230.2 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN05421757_10391 | Not Available | Positive | 1920541 - 1920855 | 11542.0 |
| inorganic triphosphatase ygif, contains cyth and chad domains | SAMN05421757_10392 | Not Available | Negative | 1921006 - 1922556 | 57220.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
