Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421757_10373 | Not Available | Positive | 1898330 - 1898623 | 10731.2 |
| udp-n-acetylmuramate dehydrogenase | SAMN05421757_10374 | Not Available | Positive | 1898721 - 1899650 | 32897.1 |
| d-alanine--d-alanine ligase | SAMN05421757_10375 | Not Available | Positive | 1899749 - 1900663 | 32627.7 |
| cell division protein ftsq | SAMN05421757_10376 | Not Available | Positive | 1900651 - 1901541 | 33304.3 |
| cell division protein ftsa | SAMN05421757_10377 | Not Available | Positive | 1901538 - 1902872 | 48178.8 |
| hypothetical protein | SAMN05421757_10378 | Not Available | Positive | 1903049 - 1904182 | 40257.7 |
| cell division protein ftsz | SAMN05421757_10379 | Not Available | Positive | 1904646 - 1906286 | 57858.4 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | SAMN05421757_10380 | Not Available | Positive | 1906525 - 1907445 | 32119.8 |
| beta-barrel assembly machine subunit bamd | SAMN05421757_10381 | Not Available | Positive | 1907576 - 1908433 | 32295.7 |
| dna replication and repair protein recn | SAMN05421757_10382 | Not Available | Positive | 1908566 - 1910215 | 58542.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
