Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421757_10343 | Not Available | Positive | 1864737 - 1868147 | 117315.0 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | SAMN05421757_10344 | Not Available | Positive | 1868150 - 1869196 | 37711.1 |
| Trna-gly | Not Available | Not Available | Positive | 1869258 - 1869332 | Not Available |
| hypothetical protein | SAMN05421757_10346 | Not Available | Negative | 1869442 - 1869828 | 13659.2 |
| hypothetical protein | SAMN05421757_10347 | Not Available | Negative | 1870027 - 1870209 | 6642.36 |
| hypothetical protein | SAMN05421757_10348 | Not Available | Negative | 1870235 - 1870639 | 14047.5 |
| pyruvate carboxylase | SAMN05421757_10349 | Not Available | Negative | 1870759 - 1874199 | 126721.0 |
| atp-dependent dna helicase, rep family | SAMN05421757_10350 | Not Available | Positive | 1874426 - 1876786 | 87093.8 |
| two-component system, ntrc family, nitrogen regulation response regulator ntrx | SAMN05421757_10351 | Not Available | Positive | 1876860 - 1877273 | 14856.9 |
| protein of unknown function | SAMN05421757_10352 | Not Available | Negative | 1877442 - 1877660 | 8211.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
