Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf302 family | SAMN05421757_10313 | Not Available | Positive | 1837206 - 1837658 | 15482.5 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN05421757_10314 | Not Available | Negative | 1837655 - 1838368 | 24580.5 |
| uncharacterized conserved protein, duf2147 family | SAMN05421757_10315 | Not Available | Positive | 1838502 - 1838891 | 13253.8 |
| hypothetical protein | SAMN05421757_10316 | Not Available | Negative | 1839026 - 1839514 | 17517.6 |
| imidazole glycerol phosphate synthase subunit hish | SAMN05421757_10317 | Not Available | Negative | 1839803 - 1840444 | 23075.5 |
| imidazoleglycerol-phosphate dehydratase | SAMN05421757_10318 | Not Available | Negative | 1840446 - 1841033 | 21462.6 |
| Trna-gly | Not Available | Not Available | Positive | 1841243 - 1841317 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 1841786 - 1841862 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 1841953 - 1842029 | Not Available |
| hypothetical protein | SAMN05421757_10322 | Not Available | Positive | 1842139 - 1842360 | 8171.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
