Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein | SAMN05421757_102860 | Not Available | Negative | 1817259 - 1818719 | 55295.6 |
| uncharacterized conserved protein | SAMN05421757_102861 | Not Available | Negative | 1818789 - 1820276 | 55352.1 |
| transcriptional regulator, arac family | SAMN05421757_102862 | Not Available | Positive | 1820425 - 1821459 | 37895.4 |
| hypothetical protein | SAMN05421757_102863 | Not Available | Positive | 1821702 - 1822154 | 15728.7 |
| prolipoprotein diacylglyceryl transferase | SAMN05421757_102864 | Not Available | Positive | 1822623 - 1823564 | 34576.8 |
| hypothetical protein | SAMN05421757_102865 | Not Available | Negative | 1823552 - 1824187 | 22701.2 |
| hypothetical protein | SAMN05421757_102866 | Not Available | Positive | 1824357 - 1825166 | 29789.1 |
| hypothetical protein | SAMN05421757_102867 | Not Available | Negative | 1825486 - 1825682 | 7386.56 |
| hypothetical protein | SAMN05421757_1031 | Not Available | Negative | 1827204 - 1827941 | 27114.1 |
| hypothetical protein | SAMN05421757_1032 | Not Available | Negative | 1828184 - 1828435 | 9086.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
