Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_102850 | Not Available | Negative | 1806041 - 1806502 | 16596.8 |
| hypothetical protein | SAMN05421757_102851 | Not Available | Negative | 1806690 - 1806875 | 6457.06 |
| voltage-gated potassium channel | SAMN05421757_102852 | Not Available | Positive | 1807234 - 1808007 | 28989.9 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN05421757_102853 | Not Available | Negative | 1808117 - 1809637 | 55177.4 |
| transcriptional regulator, lysr family | SAMN05421757_102854 | Not Available | Negative | 1810619 - 1811521 | 32867.0 |
| hypothetical protein | SAMN05421757_102855 | Not Available | Positive | 1811732 - 1812157 | 15159.8 |
| transcriptional regulator, tetr family | SAMN05421757_102856 | Not Available | Negative | 1812216 - 1812791 | 22139.8 |
| arylsulfatase | SAMN05421757_102857 | Not Available | Positive | 1812907 - 1814028 | 41390.4 |
| arylsulfatase | SAMN05421757_102858 | Not Available | Positive | 1814087 - 1815670 | 57898.7 |
| hypothetical protein | SAMN05421757_102859 | Not Available | Positive | 1815688 - 1816506 | 29636.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
