Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_102830 | Not Available | Negative | 1780415 - 1781884 | 52606.7 |
| adenylate cyclase, class 3 | SAMN05421757_102831 | Not Available | Negative | 1781899 - 1782954 | 38654.2 |
| hemoglobin | SAMN05421757_102832 | Not Available | Negative | 1782956 - 1783315 | 13543.0 |
| dehydrogenase (flavoprotein) | SAMN05421757_102833 | Not Available | Negative | 1783645 - 1784820 | 41840.0 |
| putative flavoprotein involved in k+ transport | SAMN05421757_102834 | Not Available | Negative | 1784835 - 1786085 | 45096.0 |
| hypothetical protein | SAMN05421757_102835 | Not Available | Negative | 1786241 - 1786357 | 4325.31 |
| hypothetical protein | SAMN05421757_102836 | Not Available | Negative | 1786360 - 1786470 | 4240.32 |
| uncharacterized osmc-related protein | SAMN05421757_102837 | Not Available | Negative | 1786532 - 1787110 | 20201.1 |
| glutamate or tyrosine decarboxylase | SAMN05421757_102838 | Not Available | Negative | 1787335 - 1788759 | 50694.8 |
| cysteine synthase a | SAMN05421757_102839 | Not Available | Negative | 1788806 - 1790296 | 53215.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
