Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucoamylase | SAMN05421757_102820 | Not Available | Negative | 1770711 - 1772018 | 46915.2 |
| alpha/beta hydrolase fold | SAMN05421757_102821 | Not Available | Negative | 1772015 - 1772773 | 25856.7 |
| glucans biosynthesis protein | SAMN05421757_102822 | Not Available | Positive | 1773077 - 1774669 | 57744.3 |
| hypothetical protein | SAMN05421757_102823 | Not Available | Positive | 1774654 - 1774842 | 6965.35 |
| membrane glycosyltransferase | SAMN05421757_102824 | Not Available | Positive | 1774866 - 1776662 | 64779.8 |
| hypothetical protein | SAMN05421757_102825 | Not Available | Positive | 1776625 - 1777941 | 47915.1 |
| rhodanese-related sulfurtransferase | SAMN05421757_102826 | Not Available | Negative | 1778113 - 1778481 | 12606.0 |
| predicted peroxiredoxin | SAMN05421757_102827 | Not Available | Negative | 1778506 - 1778877 | 13061.5 |
| inner membrane protein | SAMN05421757_102828 | Not Available | Negative | 1779019 - 1779564 | 18942.8 |
| transcriptional regulator, tetr family | SAMN05421757_102829 | Not Available | Positive | 1779763 - 1780392 | 23731.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
