Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maleylacetoacetate isomerase | SAMN05421757_102800 | Not Available | Positive | 1747132 - 1747764 | 23094.7 |
| fumarylacetoacetate hydrolase | SAMN05421757_102801 | Not Available | Positive | 1747775 - 1749028 | 45461.9 |
| dna-binding transcriptional regulator, marr family | SAMN05421757_102802 | Not Available | Negative | 1749093 - 1749521 | 16091.3 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN05421757_102803 | Not Available | Negative | 1749636 - 1750730 | 40805.1 |
| transcriptional regulator, asnc family | SAMN05421757_102804 | Not Available | Positive | 1750868 - 1751320 | 16630.1 |
| luciferase family oxidoreductase, group 1 | SAMN05421757_102805 | Not Available | Negative | 1751324 - 1752319 | 34993.0 |
| hypothetical protein | SAMN05421757_102806 | Not Available | Negative | 1752440 - 1753144 | 26365.3 |
| transcriptional regulator, lysr family | SAMN05421757_102807 | Not Available | Negative | 1753200 - 1754162 | 35122.1 |
| zinc-binding alcohol dehydrogenase family protein | SAMN05421757_102808 | Not Available | Positive | 1754295 - 1755371 | 37760.2 |
| predicted snoal-like aldol condensation-catalyzing enzyme | SAMN05421757_102809 | Not Available | Positive | 1755386 - 1755769 | 14546.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
