Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative solute:sodium symporter small subunit | SAMN05421757_102770 | Not Available | Negative | 1716190 - 1716429 | 9105.14 |
| adenylate kinase | SAMN05421757_102771 | Not Available | Negative | 1716553 - 1717230 | 23801.4 |
| acetyl-coenzyme a synthetase | SAMN05421757_102772 | Not Available | Negative | 1717235 - 1719208 | 72804.2 |
| l-lactate dehydrogenase (cytochrome) | SAMN05421757_102773 | Not Available | Negative | 1719676 - 1720845 | 43421.6 |
| tryptophan synthase, alpha chain | SAMN05421757_102774 | Not Available | Negative | 1721015 - 1721806 | 27762.2 |
| hypothetical protein | SAMN05421757_102775 | Not Available | Positive | 1721963 - 1723060 | 39212.9 |
| Trna-cys | Not Available | Not Available | Positive | 1723168 - 1723241 | Not Available |
| two component transcriptional regulator, winged helix family | SAMN05421757_102777 | Not Available | Negative | 1723576 - 1724301 | 27128.7 |
| trimethylamine-n-oxide reductase (cytochrome c), cytochrome c-type subunit torc | SAMN05421757_102778 | Not Available | Positive | 1724452 - 1725624 | 43204.7 |
| trimethylamine-n-oxide reductase (cytochrome c) | SAMN05421757_102779 | Not Available | Positive | 1725905 - 1728364 | 89753.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
