Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium uptake protein trkh | SAMN05421757_102749 | Not Available | Negative | 1693690 - 1695138 | 51361.3 |
| gtp cyclohydrolase i | SAMN05421757_102750 | Not Available | Negative | 1695311 - 1696414 | 41151.5 |
| gmp synthase (glutamine-hydrolysing) | SAMN05421757_102751 | Not Available | Negative | 1696538 - 1697272 | 26894.3 |
| helix-turn-helix | SAMN05421757_102752 | Not Available | Negative | 1697324 - 1698178 | 31488.4 |
| uncharacterized membrane protein | SAMN05421757_102753 | Not Available | Positive | 1698299 - 1698508 | 7438.37 |
| o-succinylhomoserine sulfhydrylase | SAMN05421757_102754 | Not Available | Negative | 1698532 - 1699710 | 42612.2 |
| alpha/beta hydrolase of unknown function | SAMN05421757_102756 | Not Available | Positive | 1699977 - 1700912 | 33647.9 |
| intracellular septation protein | SAMN05421757_102757 | Not Available | Negative | 1701003 - 1701614 | 22738.3 |
| eama-like transporter family protein | SAMN05421757_102758 | Not Available | Negative | 1701677 - 1702579 | 32548.5 |
| methyltransferase domain-containing protein | SAMN05421757_102759 | Not Available | Negative | 1702683 - 1703453 | 27964.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
