Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropteroate synthase | SAMN05421757_102739 | Not Available | Negative | 1680372 - 1681397 | 35893.1 |
| dihydroneopterin aldolase | SAMN05421757_102740 | Not Available | Negative | 1681433 - 1682347 | 33409.1 |
| cell wall hydrolase | SAMN05421757_102741 | Not Available | Negative | 1682494 - 1683045 | 20521.4 |
| pyruvate phosphate dikinase | SAMN05421757_102742 | Not Available | Negative | 1683368 - 1685917 | 92491.0 |
| glycyl-trna synthetase beta chain | SAMN05421757_102743 | Not Available | Negative | 1686060 - 1688279 | 80492.9 |
| glutamate:na+ symporter, ess family | SAMN05421757_102744 | Not Available | Negative | 1688289 - 1689500 | 42685.5 |
| hypothetical protein | SAMN05421757_102745 | Not Available | Negative | 1689497 - 1689964 | 16953.1 |
| multiple antibiotic resistance protein | SAMN05421757_102746 | Not Available | Positive | 1690057 - 1690692 | 21856.1 |
| glycyl-trna synthetase alpha chain | SAMN05421757_102747 | Not Available | Negative | 1690725 - 1691654 | 34824.2 |
| sporulation related domain-containing protein | SAMN05421757_102748 | Not Available | Positive | 1691875 - 1693659 | 63705.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
