Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, gntr family | SAMN05421757_102729 | Not Available | Negative | 1671798 - 1672448 | 23941.5 |
| putative hydrolase of the had superfamily | SAMN05421757_102730 | Not Available | Positive | 1672595 - 1673245 | 24425.8 |
| hypothetical protein | SAMN05421757_102731 | Not Available | Positive | 1673346 - 1673582 | 7973.89 |
| 2-octaprenyl-6-methoxyphenol hydroxylase | SAMN05421757_102732 | Not Available | Positive | 1673676 - 1674875 | 43291.3 |
| aspartate aminotransferase | SAMN05421757_102733 | Not Available | Negative | 1674927 - 1676054 | 40378.2 |
| hypothetical protein | SAMN05421757_102734 | Not Available | Negative | 1676121 - 1676822 | 26388.3 |
| dna-binding transcriptional regulator, lrp family | SAMN05421757_102735 | Not Available | Negative | 1676885 - 1677343 | 16761.5 |
| transcriptional regulator, asnc family | SAMN05421757_102736 | Not Available | Negative | 1677340 - 1677795 | 17175.1 |
| ketol-acid reductoisomerase | SAMN05421757_102737 | Not Available | Positive | 1677937 - 1678959 | 37143.7 |
| phosphoglucosamine mutase | SAMN05421757_102738 | Not Available | Negative | 1679032 - 1680375 | 47517.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
