Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna-binding domain-containing protein | SAMN05421757_102709 | Not Available | Positive | 1652417 - 1653166 | 26591.9 |
| putative oxidoreductase | SAMN05421757_102710 | Not Available | Positive | 1653171 - 1653779 | 22045.1 |
| cold-shock dna-binding protein family | SAMN05421757_102711 | Not Available | Positive | 1653941 - 1654147 | 7408.78 |
| hypothetical protein | SAMN05421757_102712 | Not Available | Positive | 1654360 - 1654659 | 11157.6 |
| hypothetical protein | SAMN05421757_102713 | Not Available | Positive | 1654892 - 1655176 | 10270.0 |
| transcriptional regulator, spx/mgsr family | SAMN05421757_102714 | Not Available | Negative | 1655199 - 1655525 | 12165.5 |
| uncharacterized membrane protein | SAMN05421757_102715 | Not Available | Negative | 1655591 - 1655989 | 14188.9 |
| transcriptional regulator, trar/dksa family | SAMN05421757_102716 | Not Available | Negative | 1656042 - 1656374 | 12141.4 |
| Trna-leu | Not Available | Not Available | Positive | 1656711 - 1656797 | Not Available |
| putative peptidoglycan binding domain-containing protein | SAMN05421757_102718 | Not Available | Negative | 1656947 - 1658311 | 46545.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
