Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multisubunit potassium/proton antiporter, phag subunit | SAMN05421757_102659 | Not Available | Positive | 1590984 - 1591367 | 13822.1 |
| peroxiredoxin | SAMN05421757_102660 | Not Available | Positive | 1591394 - 1591912 | 18521.1 |
| phosphate butyryltransferase | SAMN05421757_102661 | Not Available | Negative | 1591937 - 1593343 | 49106.1 |
| glutaryl-coa dehydrogenase | SAMN05421757_102662 | Not Available | Negative | 1593507 - 1594733 | 44753.7 |
| transcriptional regulator, asnc family | SAMN05421757_102663 | Not Available | Positive | 1594913 - 1595152 | 8942.62 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN05421757_102664 | Not Available | Negative | 1595162 - 1595884 | 26498.7 |
| succinyl-coa:acetate coa-transferase | SAMN05421757_102665 | Not Available | Positive | 1596295 - 1597812 | 55327.0 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN05421757_102666 | Not Available | Negative | 1597886 - 1598836 | 33960.5 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN05421757_102667 | Not Available | Negative | 1598892 - 1599893 | 34765.7 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05421757_102668 | Not Available | Negative | 1599886 - 1601442 | 56345.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
