Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_102649 | Not Available | Positive | 1579231 - 1579593 | 12744.2 |
| putative abc transport system atp-binding protein | SAMN05421757_102650 | Not Available | Positive | 1580065 - 1580793 | 25834.1 |
| putative abc transport system permease protein | SAMN05421757_102651 | Not Available | Positive | 1580787 - 1583162 | 84283.3 |
| hlyd family secretion protein | SAMN05421757_102652 | Not Available | Positive | 1583170 - 1584402 | 43869.7 |
| nucleotide-binding universal stress protein, uspa family | SAMN05421757_102653 | Not Available | Negative | 1584420 - 1584854 | 15738.7 |
| multisubunit potassium/proton antiporter, phaa subunit /multisubunit potassium/proton antiporter, phab subunit | SAMN05421757_102654 | Not Available | Positive | 1585391 - 1588261 | 103166.0 |
| multisubunit potassium/proton antiporter, phac subunit | SAMN05421757_102655 | Not Available | Positive | 1588263 - 1588679 | 14995.2 |
| multisubunit potassium/proton antiporter, phad subunit | SAMN05421757_102656 | Not Available | Positive | 1588676 - 1590202 | 53537.1 |
| multisubunit potassium/proton antiporter, phae subunit | SAMN05421757_102657 | Not Available | Positive | 1590207 - 1590710 | 18535.2 |
| multisubunit potassium/proton antiporter, phaf subunit | SAMN05421757_102658 | Not Available | Positive | 1590707 - 1590976 | 9897.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
