Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin carboxylase /acetyl-coa carboxylase carboxyltransferase subunit alpha | SAMN05421757_102639 | Not Available | Positive | 1571900 - 1573249 | 48823.5 |
| leucyl/phenylalanyl-trna--protein transferase | SAMN05421757_102640 | Not Available | Positive | 1573338 - 1573973 | 23504.9 |
| hypothetical protein | SAMN05421757_102641 | Not Available | Negative | 1573937 - 1574290 | 12744.1 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN05421757_102642 | Not Available | Negative | 1574290 - 1574742 | 15134.7 |
| nadh:ubiquinone oxidoreductase subunit | SAMN05421757_102643 | Not Available | Negative | 1574806 - 1575192 | 14895.3 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05421757_102644 | Not Available | Negative | 1575276 - 1575659 | 13785.5 |
| cytochrome c | SAMN05421757_102645 | Not Available | Negative | 1575785 - 1576207 | 14863.7 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN05421757_102646 | Not Available | Negative | 1576378 - 1577640 | 45910.8 |
| atp-dependent clp protease proteolytic subunit clpp | SAMN05421757_102647 | Not Available | Negative | 1577817 - 1578449 | 23283.1 |
| activator of hsp90 atpase homolog 1-like protein | SAMN05421757_102648 | Not Available | Positive | 1578721 - 1579188 | 17331.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
