Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_101108 | Not Available | Positive | 115251 - 115982 | 27255.8 |
| electron-transferring-flavoprotein dehydrogenase | SAMN05421757_101109 | Not Available | Positive | 116149 - 117801 | 59374.3 |
| tetratricopeptide repeat-containing protein | SAMN05421757_101110 | Not Available | Positive | 117958 - 119673 | 62101.0 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN05421757_101111 | Not Available | Positive | 119660 - 120496 | 28968.9 |
| octaprenyl-diphosphate synthase | SAMN05421757_101112 | Not Available | Negative | 120561 - 121562 | 36658.6 |
| putative signal transducing protein | SAMN05421757_101113 | Not Available | Positive | 121619 - 121840 | 8301.13 |
| trna1(val) a37 n6-methylase trmn6 | SAMN05421757_101114 | Not Available | Positive | 121842 - 122606 | 26851.4 |
| hypothetical protein | SAMN05421757_101115 | Not Available | Positive | 122733 - 122900 | 6183.53 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05421757_101116 | Not Available | Negative | 122878 - 123771 | 30308.8 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN05421757_101117 | Not Available | Negative | 123881 - 124606 | 25688.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
