Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase a | SAMN05421757_102569 | Not Available | Negative | 1503114 - 1504703 | 60353.3 |
| trap transporter, dctm subunit | SAMN05421757_102570 | Not Available | Negative | 1504709 - 1506004 | 45528.9 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05421757_102571 | Not Available | Negative | 1506004 - 1506501 | 17450.0 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05421757_102572 | Not Available | Negative | 1506529 - 1507536 | 35422.9 |
| glutathione s-transferase | SAMN05421757_102573 | Not Available | Negative | 1507611 - 1508423 | 30578.0 |
| dna-binding transcriptional regulator, lysr family | SAMN05421757_102574 | Not Available | Positive | 1508543 - 1509457 | 32998.1 |
| uncharacterized conserved protein, duf849 family | SAMN05421757_102575 | Not Available | Negative | 1509485 - 1510414 | 33876.4 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05421757_102576 | Not Available | Negative | 1510418 - 1511446 | 36579.8 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05421757_102577 | Not Available | Negative | 1511443 - 1512306 | 29747.2 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05421757_102578 | Not Available | Negative | 1512308 - 1513015 | 25205.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
