Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate transporter | SAMN05421757_102559 | Not Available | Negative | 1491253 - 1492113 | 30772.1 |
| pyruvate formate lyase activating enzyme | SAMN05421757_102560 | Not Available | Negative | 1492173 - 1492952 | 29101.9 |
| formate c-acetyltransferase | SAMN05421757_102561 | Not Available | Negative | 1493002 - 1495257 | 83760.5 |
| sporulation protein ylmc, prc-barrel domain family | SAMN05421757_102562 | Not Available | Negative | 1496023 - 1496682 | 23779.0 |
| hypothetical protein | SAMN05421757_102563 | Not Available | Positive | 1496823 - 1497083 | 9010.68 |
| uncharacterized conserved protein | SAMN05421757_102564 | Not Available | Negative | 1497089 - 1497703 | 22154.6 |
| hypothetical protein | SAMN05421757_102565 | Not Available | Negative | 1497742 - 1498104 | 12728.1 |
| prc-barrel domain-containing protein | SAMN05421757_102566 | Not Available | Negative | 1498276 - 1499238 | 34334.3 |
| trka-c domain-containing protein | SAMN05421757_102567 | Not Available | Negative | 1499458 - 1501239 | 62432.5 |
| sulfate permease, sulp family | SAMN05421757_102568 | Not Available | Negative | 1501316 - 1503106 | 62424.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
