Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_102539 | Not Available | Positive | 1464493 - 1464918 | 14734.5 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | SAMN05421757_102540 | Not Available | Negative | 1464958 - 1466097 | 40235.2 |
| putative phosphonate metabolism protein | SAMN05421757_102541 | Not Available | Positive | 1466169 - 1466858 | 25420.6 |
| ribose 1,5-bisphosphokinase | SAMN05421757_102542 | Not Available | Negative | 1466840 - 1467382 | 19635.5 |
| magnesium transporter | SAMN05421757_102543 | Not Available | Negative | 1467530 - 1468492 | 35596.0 |
| hypothetical protein | SAMN05421757_102544 | Not Available | Positive | 1468732 - 1468878 | 5180.36 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | SAMN05421757_102545 | Not Available | Positive | 1469131 - 1470306 | 42323.8 |
| acetolactate synthase-1/2/3 large subunit | SAMN05421757_102546 | Not Available | Negative | 1470432 - 1471973 | 53817.7 |
| predicted oxidoreductase | SAMN05421757_102547 | Not Available | Positive | 1472231 - 1473124 | 32672.4 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05421757_102548 | Not Available | Positive | 1473169 - 1473675 | 18029.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
