Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_102499 | Not Available | Positive | 1422251 - 1423573 | 48436.8 |
| sulfotransferase family protein | SAMN05421757_102500 | Not Available | Negative | 1423555 - 1424511 | 34358.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421757_102501 | Not Available | Negative | 1424508 - 1425527 | 37008.6 |
| glycosyl transferase family 2 | SAMN05421757_102502 | Not Available | Negative | 1425542 - 1426540 | 36421.9 |
| glycosyl transferase family 2 | SAMN05421757_102503 | Not Available | Negative | 1426557 - 1427480 | 33140.6 |
| polysaccharide transporter, pst family | SAMN05421757_102504 | Not Available | Negative | 1427484 - 1428728 | 43773.8 |
| polysaccharide biosynthesis/export protein | SAMN05421757_102505 | Not Available | Positive | 1428830 - 1430194 | 48553.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05421757_102506 | Not Available | Positive | 1430284 - 1431192 | 33040.9 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05421757_102507 | Not Available | Positive | 1431322 - 1432482 | 42506.5 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN05421757_102508 | Not Available | Positive | 1432547 - 1433548 | 35958.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
