Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-associated phospholipid phosphatase | SAMN05421757_102479 | Not Available | Negative | 1398840 - 1399955 | 38747.2 |
| hypothetical protein | SAMN05421757_102480 | Not Available | Positive | 1400115 - 1401737 | 60085.3 |
| hypothetical protein | SAMN05421757_102481 | Not Available | Positive | 1401809 - 1402300 | 16786.0 |
| hypothetical protein | SAMN05421757_102482 | Not Available | Negative | 1402472 - 1405231 | 96568.0 |
| transcriptional regulator, tetr family | SAMN05421757_102483 | Not Available | Negative | 1405480 - 1406034 | 20393.4 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05421757_102484 | Not Available | Positive | 1406292 - 1406846 | 20452.3 |
| predicted dithiol-disulfide isomerase, dsba family | SAMN05421757_102485 | Not Available | Positive | 1406899 - 1407561 | 25142.7 |
| gst-like protein | SAMN05421757_102486 | Not Available | Positive | 1407579 - 1408454 | 32661.3 |
| ferredoxin-type protein napf | SAMN05421757_102487 | Not Available | Positive | 1408719 - 1409225 | 17460.8 |
| periplasmic nitrate reductase chaperone napd | SAMN05421757_102488 | Not Available | Positive | 1409222 - 1409503 | 9936.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
