Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421757_102459 | Not Available | Positive | 1374045 - 1374458 | 15184.1 |
| hypothetical protein | SAMN05421757_102460 | Not Available | Positive | 1374719 - 1376614 | 70945.8 |
| transcriptional regulator, arac family | SAMN05421757_102461 | Not Available | Positive | 1376851 - 1377876 | 37749.2 |
| hypothetical protein | SAMN05421757_102462 | Not Available | Positive | 1378199 - 1378480 | 9914.95 |
| protein of unknown function | SAMN05421757_102463 | Not Available | Positive | 1378659 - 1380587 | 70806.4 |
| protein of unknown function | SAMN05421757_102464 | Not Available | Positive | 1380789 - 1381355 | 20286.0 |
| succinate dehydrogenase/fumarate reductase, flavoprotein subunit | SAMN05421757_102465 | Not Available | Negative | 1381403 - 1383166 | 62100.9 |
| ferric reductase like transmembrane component | SAMN05421757_102466 | Not Available | Negative | 1383163 - 1383831 | 24090.8 |
| 4fe-4s dicluster domain-containing protein | SAMN05421757_102467 | Not Available | Negative | 1383834 - 1384049 | 7609.51 |
| d-fructose 1,6-bisphosphatase | SAMN05421757_102468 | Not Available | Negative | 1384358 - 1385386 | 37781.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
