Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_102439 | Not Available | Positive | 1350926 - 1351432 | 18411.8 |
| dna-binding transcriptional regulator, gntr family | SAMN05421757_102440 | Not Available | Positive | 1351566 - 1352276 | 25894.9 |
| snoal-like domain-containing protein | SAMN05421757_102441 | Not Available | Negative | 1352286 - 1352708 | 15638.4 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05421757_102442 | Not Available | Positive | 1352931 - 1354103 | 41456.7 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05421757_102443 | Not Available | Positive | 1354201 - 1355076 | 30302.2 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05421757_102444 | Not Available | Positive | 1355081 - 1357606 | 88234.5 |
| cytosine deaminase | SAMN05421757_102445 | Not Available | Positive | 1357603 - 1358856 | 44526.6 |
| protein of unknown function | SAMN05421757_102446 | Not Available | Positive | 1358859 - 1359239 | 14238.7 |
| hypothetical protein | SAMN05421757_102447 | Not Available | Negative | 1359307 - 1360575 | 46654.0 |
| membrane glycosyltransferase | SAMN05421757_102448 | Not Available | Negative | 1360577 - 1362349 | 63497.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
