Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_10188 | Not Available | Negative | 95870 - 96274 | 14062.1 |
| aspartate carbamoyltransferase | SAMN05421757_10189 | Not Available | Negative | 96267 - 97211 | 34328.8 |
| dna polymerase | SAMN05421757_10190 | Not Available | Positive | 97331 - 98152 | 29855.0 |
| molybdenum cofactor biosynthesis protein b | SAMN05421757_10191 | Not Available | Positive | 98164 - 98706 | 19708.5 |
| hlyd family secretion protein | SAMN05421757_10192 | Not Available | Positive | 98833 - 100305 | 52531.8 |
| multidrug efflux pump subunit acrb | SAMN05421757_10193 | Not Available | Positive | 100310 - 103756 | 124145.0 |
| disulphide bond corrector protein dsbc | SAMN05421757_10194 | Not Available | Negative | 103792 - 104610 | 28913.7 |
| putative transcriptional regulator | SAMN05421757_10195 | Not Available | Positive | 104726 - 105295 | 20507.4 |
| translation factor sua5 | SAMN05421757_10196 | Not Available | Negative | 105380 - 106333 | 32489.6 |
| hypothetical protein | SAMN05421757_10197 | Not Available | Positive | 106459 - 108168 | 60337.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
