Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_102419 | Not Available | Negative | 1329870 - 1330112 | 8459.68 |
| protein of unknown function | SAMN05421757_102420 | Not Available | Negative | 1330114 - 1330413 | 10618.1 |
| methylmalonyl-coa epimerase /ethylmalonyl-coa epimerase | SAMN05421757_102421 | Not Available | Negative | 1330417 - 1330821 | 14541.6 |
| response regulator receiver domain-containing protein | SAMN05421757_102422 | Not Available | Positive | 1330969 - 1331688 | 25447.6 |
| uncharacterized conserved protein, duf1501 family | SAMN05421757_102423 | Not Available | Negative | 1331738 - 1332979 | 43197.9 |
| uncharacterized conserved protein, duf1800 family | SAMN05421757_102424 | Not Available | Negative | 1332989 - 1334362 | 49743.3 |
| aspartyl-trna synthetase | SAMN05421757_102425 | Not Available | Negative | 1334566 - 1336341 | 66919.8 |
| hypothetical protein | SAMN05421757_102426 | Not Available | Negative | 1336566 - 1337360 | 27918.2 |
| uracil-dna glycosylase | SAMN05421757_102427 | Not Available | Negative | 1337357 - 1337944 | 22103.6 |
| transcriptional regulator, arsr family | SAMN05421757_102428 | Not Available | Positive | 1338027 - 1338383 | 12509.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
