Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_102409 | Not Available | Negative | 1323606 - 1323842 | 8912.61 |
| molecular chaperone ibpa, hsp20 family | SAMN05421757_102410 | Not Available | Negative | 1323853 - 1324266 | 15330.1 |
| hypothetical protein | SAMN05421757_102411 | Not Available | Positive | 1324434 - 1324652 | 8292.15 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMN05421757_102412 | Not Available | Positive | 1324721 - 1325215 | 16939.6 |
| pyrroline-5-carboxylate reductase | SAMN05421757_102413 | Not Available | Positive | 1325212 - 1325970 | 25918.3 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | SAMN05421757_102414 | Not Available | Positive | 1325970 - 1327043 | 37939.2 |
| hypothetical protein | SAMN05421757_102415 | Not Available | Negative | 1327139 - 1327396 | 8910.86 |
| acetoin utilization deacetylase acuc | SAMN05421757_102416 | Not Available | Positive | 1327459 - 1328565 | 39554.1 |
| nitroreductase | SAMN05421757_102417 | Not Available | Positive | 1328598 - 1329176 | 21006.3 |
| uncharacterized protein involved in cysteine biosynthesis | SAMN05421757_102418 | Not Available | Positive | 1329173 - 1329877 | 25410.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
