Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_102367 | Not Available | Negative | 1282223 - 1282660 | 16345.5 |
| cob(i)alamin adenosyltransferase | SAMN05421757_102368 | Not Available | Negative | 1282777 - 1283385 | 22573.4 |
| uncharacterized conserved protein | SAMN05421757_102369 | Not Available | Negative | 1283382 - 1283792 | 15117.7 |
| cobaltochelatase cobn subunit | SAMN05421757_102370 | Not Available | Negative | 1283792 - 1287613 | 137266.0 |
| putative acetyltransferase | SAMN05421757_102371 | Not Available | Negative | 1287614 - 1288069 | 16639.9 |
| cobalamin biosynthesis protein cobw | SAMN05421757_102372 | Not Available | Negative | 1288066 - 1289136 | 38274.3 |
| precorrin-6a reductase | SAMN05421757_102374 | Not Available | Negative | 1289435 - 1290184 | 25703.2 |
| cobalt-precorrin-5b (c1)-methyltransferase | SAMN05421757_102375 | Not Available | Negative | 1290196 - 1291269 | 36376.9 |
| uroporphyrin-iii c-methyltransferase | SAMN05421757_102376 | Not Available | Positive | 1291381 - 1292241 | 30332.9 |
| cobyrinic acid a,c-diamide synthase | SAMN05421757_102377 | Not Available | Positive | 1292238 - 1293527 | 44879.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
