Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sh3 domain-containing protein | SAMN05421757_102317 | Not Available | Positive | 1237758 - 1238057 | 10271.6 |
| putative flp pilus-assembly tade/g-like | SAMN05421757_102318 | Not Available | Positive | 1238518 - 1240116 | 58379.6 |
| flp pilus assembly protein tadg | SAMN05421757_102319 | Not Available | Positive | 1240312 - 1241949 | 60391.3 |
| hypothetical protein | SAMN05421757_102320 | Not Available | Positive | 1241963 - 1242217 | 9495.44 |
| tade-like protein | SAMN05421757_102321 | Not Available | Positive | 1242192 - 1242743 | 20726.3 |
| hypothetical protein | SAMN05421757_102322 | Not Available | Positive | 1242757 - 1243368 | 22893.0 |
| hypothetical protein | SAMN05421757_102323 | Not Available | Negative | 1243424 - 1243933 | 18205.1 |
| hypothetical protein | SAMN05421757_102324 | Not Available | Positive | 1244085 - 1244996 | 33212.2 |
| transcriptional regulator, tetr family | SAMN05421757_102325 | Not Available | Negative | 1244977 - 1245633 | 24173.8 |
| hypothetical protein | SAMN05421757_102326 | Not Available | Positive | 1245738 - 1246070 | 11156.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
