Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kef-type potassium/proton antiporter, cpa2 family | SAMN05421757_102266 | Not Available | Positive | 1188966 - 1190900 | 70219.2 |
| nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase | SAMN05421757_102267 | Not Available | Negative | 1191037 - 1192065 | 34345.1 |
| cobalamin-5'-phosphate synthase | SAMN05421757_102268 | Not Available | Positive | 1192137 - 1192892 | 24771.1 |
| transcriptional regulator, card family | SAMN05421757_102269 | Not Available | Negative | 1192984 - 1193493 | 18827.5 |
| ferredoxin | SAMN05421757_102270 | Not Available | Negative | 1193818 - 1194153 | 12489.7 |
| heat shock protein hsp15 | SAMN05421757_102271 | Not Available | Negative | 1194203 - 1194604 | 14591.4 |
| atp-dependent rna helicase supv3l1/suv3 | SAMN05421757_102272 | Not Available | Negative | 1194621 - 1197551 | 107444.0 |
| tetratricopeptide repeat-containing protein | SAMN05421757_102273 | Not Available | Negative | 1197582 - 1198211 | 22975.4 |
| scp-2 sterol transfer family protein | SAMN05421757_102274 | Not Available | Positive | 1198226 - 1198513 | 9628.34 |
| lysophospholipase | SAMN05421757_102275 | Not Available | Positive | 1198539 - 1199489 | 34375.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
