Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system atp-binding protein | SAMN05421757_102256 | Not Available | Negative | 1177061 - 1177993 | 33844.8 |
| hlyd family secretion protein | SAMN05421757_102257 | Not Available | Negative | 1177990 - 1178946 | 33764.1 |
| transcriptional regulator, tetr family | SAMN05421757_102258 | Not Available | Negative | 1178943 - 1179605 | 24345.1 |
| cytochrome c | SAMN05421757_102259 | Not Available | Negative | 1179724 - 1180041 | 11759.4 |
| cytochrome c2 | SAMN05421757_102260 | Not Available | Negative | 1180326 - 1181192 | 30686.5 |
| o-acetylhomoserine sulfhydrylase | SAMN05421757_102261 | Not Available | Positive | 1181404 - 1182696 | 45649.3 |
| hypothetical protein | SAMN05421757_102262 | Not Available | Negative | 1182736 - 1183350 | 21464.5 |
| hypothetical protein | SAMN05421757_102263 | Not Available | Negative | 1183362 - 1184588 | 43248.6 |
| hypothetical protein | SAMN05421757_102264 | Not Available | Negative | 1184685 - 1185419 | 24753.4 |
| hypothetical protein | SAMN05421757_102265 | Not Available | Positive | 1185584 - 1188703 | 107553.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
