Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+-transporting nadh:ubiquinone oxidoreductase subunit b | SAMN05421757_102246 | Not Available | Positive | 1166165 - 1167376 | 44572.1 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit c | SAMN05421757_102247 | Not Available | Positive | 1167369 - 1168178 | 29431.5 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit d | SAMN05421757_102248 | Not Available | Positive | 1168178 - 1168831 | 23814.9 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit e | SAMN05421757_102249 | Not Available | Positive | 1168831 - 1169439 | 21371.8 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit f | SAMN05421757_102250 | Not Available | Positive | 1169453 - 1170673 | 45306.3 |
| cbs domain-containing protein | SAMN05421757_102251 | Not Available | Positive | 1170894 - 1171415 | 18977.8 |
| predicted dehydrogenase | SAMN05421757_102252 | Not Available | Negative | 1171619 - 1172665 | 36766.1 |
| proline racemase | SAMN05421757_102253 | Not Available | Negative | 1172757 - 1173791 | 36666.9 |
| hypothetical protein | SAMN05421757_102254 | Not Available | Negative | 1173791 - 1175836 | 73797.2 |
| abc-2 type transport system permease protein | SAMN05421757_102255 | Not Available | Negative | 1175931 - 1177064 | 41418.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
