Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) domain-containing protein | SAMN05421757_102236 | Not Available | Positive | 1157092 - 1157568 | 17414.0 |
| biotin transport system substrate-specific component | SAMN05421757_102237 | Not Available | Negative | 1157630 - 1158235 | 20983.4 |
| hypothetical protein | SAMN05421757_102238 | Not Available | Negative | 1158305 - 1158730 | 16238.8 |
| n-ethylmaleimide reductase | SAMN05421757_102239 | Not Available | Negative | 1158847 - 1159950 | 39288.0 |
| adenylosuccinate lyase | SAMN05421757_102240 | Not Available | Positive | 1160174 - 1161481 | 48799.5 |
| protein of unknown function | SAMN05421757_102241 | Not Available | Positive | 1161683 - 1162984 | 47319.1 |
| hypothetical protein | SAMN05421757_102242 | Not Available | Positive | 1163053 - 1163241 | 6873.71 |
| hypothetical protein | SAMN05421757_102243 | Not Available | Negative | 1163245 - 1163475 | 8080.27 |
| thiamine biosynthesis lipoprotein | SAMN05421757_102244 | Not Available | Negative | 1163509 - 1164534 | 36129.4 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit a | SAMN05421757_102245 | Not Available | Positive | 1164755 - 1166161 | 50064.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
