Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxypyruvate reductase | SAMN05421757_10168 | Not Available | Positive | 76431 - 77687 | 42777.4 |
| serine protease sohb | SAMN05421757_10169 | Not Available | Positive | 77787 - 78578 | 28564.4 |
| cation:h+ antiporter | SAMN05421757_10170 | Not Available | Positive | 78772 - 79767 | 34698.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421757_10171 | Not Available | Positive | 79787 - 80572 | 28303.8 |
| excinuclease abc subunit c | SAMN05421757_10172 | Not Available | Positive | 80879 - 82774 | 69752.5 |
| uncharacterized conserved protein | SAMN05421757_10173 | Not Available | Positive | 82889 - 84199 | 47473.6 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | SAMN05421757_10174 | Not Available | Positive | 84286 - 84945 | 23467.3 |
| molybdopterin synthase subunit moad | SAMN05421757_10175 | Not Available | Positive | 84945 - 85199 | 9472.29 |
| molybdopterin synthase subunit moae | SAMN05421757_10176 | Not Available | Positive | 85200 - 85640 | 16379.3 |
| hypothetical protein | SAMN05421757_10177 | Not Available | Negative | 85657 - 85986 | 12410.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
