Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| grpb domain, predicted nucleotidyltransferase, upf0157 family | SAMN05421757_102206 | Not Available | Positive | 1128365 - 1128880 | 18936.4 |
| ribosomal protein s18 acetylase rimi | SAMN05421757_102207 | Not Available | Positive | 1128877 - 1129332 | 16663.1 |
| uncharacterized conserved protein ydiu, upf0061 family | SAMN05421757_102208 | Not Available | Positive | 1129377 - 1130819 | 52070.7 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05421757_102209 | Not Available | Negative | 1130826 - 1131743 | 32668.7 |
| ribosomal protein s18 acetylase rimi | SAMN05421757_102210 | Not Available | Positive | 1131911 - 1132372 | 17799.9 |
| protein of unknown function | SAMN05421757_102211 | Not Available | Positive | 1132390 - 1133742 | 49061.6 |
| hypothetical protein | SAMN05421757_102212 | Not Available | Positive | 1133773 - 1133937 | 5660.25 |
| hypothetical protein | SAMN05421757_102213 | Not Available | Positive | 1134204 - 1135385 | 45625.2 |
| eama-like transporter family protein | SAMN05421757_102214 | Not Available | Positive | 1135452 - 1136324 | 29338.9 |
| hypothetical protein | SAMN05421757_102215 | Not Available | Negative | 1136341 - 1136934 | 20963.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
