Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_102176 | Not Available | Positive | 1100552 - 1100830 | 9667.71 |
| hippurate hydrolase | SAMN05421757_102177 | Not Available | Negative | 1100840 - 1102003 | 41834.0 |
| atp diphosphatase | SAMN05421757_102178 | Not Available | Positive | 1102067 - 1102885 | 30591.7 |
| yjef c-terminal region, hydroxyethylthiazole kinase-related/yjef n-terminal region | SAMN05421757_102179 | Not Available | Negative | 1102980 - 1104599 | 56159.5 |
| nitrogen regulatory protein p-ii family | SAMN05421757_102180 | Not Available | Positive | 1104779 - 1105117 | 12271.9 |
| l-glutamine synthetase | SAMN05421757_102181 | Not Available | Positive | 1105172 - 1106578 | 52404.0 |
| hypothetical protein | SAMN05421757_102182 | Not Available | Positive | 1106793 - 1108052 | 46581.1 |
| hypothetical protein | SAMN05421757_102183 | Not Available | Negative | 1108122 - 1108352 | 8190.51 |
| predicted small metal-binding protein | SAMN05421757_102184 | Not Available | Negative | 1108579 - 1108752 | 6480.84 |
| hypothetical protein | SAMN05421757_102185 | Not Available | Positive | 1108947 - 1109852 | 32865.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
