Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_102126 | Not Available | Negative | 1041921 - 1042250 | 11727.7 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05421757_102127 | Not Available | Positive | 1042803 - 1044191 | 48310.4 |
| hypothetical protein | SAMN05421757_102128 | Not Available | Negative | 1044188 - 1044589 | 14596.7 |
| tcta family transporter | SAMN05421757_102129 | Not Available | Negative | 1044586 - 1046097 | 52783.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05421757_102130 | Not Available | Negative | 1046102 - 1047268 | 40045.8 |
| predicted atp-dependent carboligase, atp-grasp superfamily | SAMN05421757_102131 | Not Available | Positive | 1047409 - 1048740 | 50242.0 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN05421757_102132 | Not Available | Positive | 1048752 - 1050032 | 46804.3 |
| hypothetical protein | SAMN05421757_102133 | Not Available | Positive | 1050219 - 1051859 | 61348.4 |
| hypothetical protein | SAMN05421757_102134 | Not Available | Negative | 1051832 - 1052092 | 9169.98 |
| hypothetical protein | SAMN05421757_102135 | Not Available | Negative | 1052373 - 1053920 | 55741.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
