Granulicella rosea strain DSM 18704

rodaerobic

Kingdom

Pseudomonadati

Phylum

Acidobacteriota

Class

Terriglobia

Order

Terriglobales

Family

Acidobacteriaceae

Genus

Granulicella

Description

Granulicella rosea strain DSM 18704 is a Gram-negative, rod-shaped bacterium characterized as an organotroph and chemotroph, indicating its ability to utilize organic compounds for energy. This strain is aerobic, requiring oxygen for growth, and is non-motile, suggesting a lifestyle that does not involve active movement. Granulicella rosea thrives at an optimal temperature of 16°C and is classified as psychrotolerant, which means it can grow at low temperatures, although it may not be limited to them. This trait is particularly advantageous in cold environments, potentially allowing for survival and activity in diverse ecological niches where temperatures are low. The bacterium is non-spore-forming and possesses a single replicon, which may reflect its specific reproductive and genetic characteristics. The accession number for this strain is FZOU00000000.1, providing a reference for further genomic studies and research. From a biological and ecological perspective, the psychrotolerant nature of Granulicella rosea suggests its potential role in cold environments, such as polar regions or deep-sea ecosystems, where it may contribute to organic matter decomposition and nutrient cycling. Its ability to utilize organic compounds can enhance the understanding of microbial ecology in such habitats, where temperature regulation is crucial for microbial activity and community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumAcidobacteriota
ClassTerriglobia
OrderTerriglobales
FamilyAcidobacteriaceae
GenusGranulicella
SpeciesGranulicella rosea
Strainstrain DSM 18704

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceorganotroph; chemotroph
PathogenicityNot Available

Genome Summary

Granulicella rosea strain DSM 18704 genome assembly, contig:

Gene Summary

Adenine Count

982205 bp

Thymine Count

981146 bp

Guanine Count

1673612 bp

Cytosine Count

1656822 bp

Genome Length

5293785 bp

Protein-coding Genes

4309 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartate aminotransferaseSAMN05421770_1011Not AvailableNegative210 - 141243058.9
predicted pyrophosphatase or phosphodiesterase, alkp superfamilySAMN05421770_1012Not AvailableNegative1478 - 281547336.5
hypothetical proteinSAMN05421770_1013Not AvailableNegative2891 - 335217153.1
uncharacterized conserved protein, duf427 familySAMN05421770_1014Not AvailablePositive3411 - 389017712.8
methyltransferase domain-containing proteinSAMN05421770_1015Not AvailableNegative3893 - 449822687.8
phosphopantetheine adenylyltransferaseSAMN05421770_1016Not AvailableNegative4495 - 498918445.7
rna polymerase sigma-70 factor, ecf subfamilySAMN05421770_1017Not AvailablePositive5351 - 597122988.6
hypothetical proteinSAMN05421770_1018Not AvailablePositive5968 - 652819335.6
protein refolding chaperone spy/cpxp familySAMN05421770_1019Not AvailablePositive6550 - 715521307.0
recombination protein recaSAMN05421770_10110Not AvailableNegative7429 - 849637669.5

Displaying genes 1 – 10 of 4365 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.