Noviherbaspirillum sp. U15

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Noviherbaspirillum

Description

Noviherbaspirillum sp. U15 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, which is indicative of its genetic structure. The organism has been cataloged under the accession number FZOT00000000.1, allowing for its identification and retrieval in genomic databases. The classification of Noviherbaspirillum sp. U15 within the broader context of microbial ecology suggests potential roles in various biological processes. Gram-negative bacteria are often associated with diverse metabolic pathways and interactions within their environments. The rod shape of this bacterium may also influence its motility and ability to form biofilms, which are critical for survival in various ecosystems. Understanding the specific traits of Noviherbaspirillum sp. U15 can provide insights into its ecological roles, especially in nutrient cycling and interactions with other microorganisms. Further research into its metabolic capabilities and environmental interactions may reveal its significance in maintaining ecosystem balance and health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusNoviherbaspirillum
SpeciesNoviherbaspirillum humi
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Noviherbaspirillum sp. U15 genome assembly, contig: Ga0139006_156,

Gene Summary

Adenine Count

989183 bp

Thymine Count

987594 bp

Guanine Count

1699356 bp

Cytosine Count

1704152 bp

Genome Length

5381115 bp

Protein-coding Genes

4747 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid/amide abc transporter substrate-binding protein, haat familySAMN06265795_1332Not AvailableNegative5289558 - 529073041219.4
naphthalene 1,2-dioxygenase system ferredoxin subunitSAMN06265795_1333Not AvailableNegative5290866 - 529118011354.3
salicylate 5-hydroxylase small subunitSAMN06265795_1334Not AvailableNegative5291197 - 529168218934.6
salicylate 5-hydroxylase large subunitSAMN06265795_1335Not AvailableNegative5291679 - 529294148202.3
fumarylpyruvate hydrolaseSAMN06265795_1336Not AvailableNegative5292996 - 529369424856.6
gentisate 1,2-dioxygenaseSAMN06265795_1337Not AvailableNegative5293730 - 529477638832.9
ferredoxin-nad(p)+ reductase (naphthalene dioxygenase ferredoxin-specific)SAMN06265795_1338Not AvailableNegative5294800 - 529578635570.0
transcriptional regulator, lysr familySAMN06265795_1339Not AvailablePositive5295921 - 529682933593.9
hcomoda/2-hydroxy-3-carboxy-muconic semialdehyde decarboxylaseSAMN06265795_13310Not AvailableNegative5297147 - 529786326830.2
tripartite-type tricarboxylate transporter, receptor component tctcSAMN06265795_13311Not AvailableNegative5297935 - 529892734596.0

Displaying genes 4781 – 4790 of 4863 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.