Noviherbaspirillum sp. U15

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Noviherbaspirillum

Description

Noviherbaspirillum sp. U15 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, which is indicative of its genetic structure. The organism has been cataloged under the accession number FZOT00000000.1, allowing for its identification and retrieval in genomic databases. The classification of Noviherbaspirillum sp. U15 within the broader context of microbial ecology suggests potential roles in various biological processes. Gram-negative bacteria are often associated with diverse metabolic pathways and interactions within their environments. The rod shape of this bacterium may also influence its motility and ability to form biofilms, which are critical for survival in various ecosystems. Understanding the specific traits of Noviherbaspirillum sp. U15 can provide insights into its ecological roles, especially in nutrient cycling and interactions with other microorganisms. Further research into its metabolic capabilities and environmental interactions may reveal its significance in maintaining ecosystem balance and health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusNoviherbaspirillum
SpeciesNoviherbaspirillum humi
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Noviherbaspirillum sp. U15 genome assembly, contig: Ga0139006_156,

Gene Summary

Adenine Count

989183 bp

Thymine Count

987594 bp

Guanine Count

1699356 bp

Cytosine Count

1704152 bp

Genome Length

5381115 bp

Protein-coding Genes

4747 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pas domain s-box-containing proteinSAMN06265795_102316Not AvailableNegative1038371 - 104010762621.9
diguanylate cyclase (ggdef) domain-containing proteinSAMN06265795_102317Not AvailablePositive1040413 - 1043205104733.0
permease of the drug/metabolite transporter (dmt) superfamilySAMN06265795_102318Not AvailableNegative1043206 - 104410832335.3
high-affinity iron transporterSAMN06265795_102319Not AvailablePositive1044397 - 104632568347.8
iron(iii) transport system substrate-binding proteinSAMN06265795_102320Not AvailableNegative1046417 - 104748739570.5
reactivating factor of adenosylcobalamin-dependent ethanolamine ammonia lyaseSAMN06265795_102321Not AvailableNegative1047484 - 104900153349.2
cupin domain-containing proteinSAMN06265795_102322Not AvailableNegative1049096 - 105030746047.2
transcriptional regulator, copg familySAMN06265795_102323Not AvailablePositive1050552 - 105100717553.7
outer membrane receptor proteins, mostly fe transportSAMN06265795_102324Not AvailableNegative1051029 - 105312576743.1
diguanylate cyclase (ggdef) domain-containing proteinSAMN06265795_102325Not AvailablePositive1053444 - 1056221102249.0

Displaying genes 1081 – 1090 of 4863 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.