Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Dokdonia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Dokdonia |
| Species | Dokdonia pacifica |
| Strain | strain DSM 25597 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Leptonotus elevatus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1822749 bp
Thymine Count
1814606 bp
Guanine Count
931531 bp
Cytosine Count
951057 bp
Genome Length
5520745 bp
Protein-coding Genes
4863 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglutamate kinase | SAMN06265376_10137 | Not Available | Positive | 46278 - 47054 | 28444.6 |
| acetylornithine deacetylase | SAMN06265376_10138 | Not Available | Positive | 47054 - 48121 | 38810.1 |
| argininosuccinate lyase | SAMN06265376_10139 | Not Available | Positive | 48228 - 49511 | 47943.3 |
| site-specific recombinase xerd | SAMN06265376_10140 | Not Available | Positive | 49774 - 51114 | 51750.3 |
| helix-turn-helix domain-containing protein | SAMN06265376_10141 | Not Available | Positive | 51136 - 51405 | 10592.8 |
| hypothetical protein | SAMN06265376_10142 | Not Available | Positive | 51408 - 51653 | 9670.24 |
| hypothetical protein | SAMN06265376_10143 | Not Available | Negative | 51758 - 52033 | 9670.93 |
| hypothetical protein | SAMN06265376_10144 | Not Available | Positive | 52054 - 52179 | 4443.36 |
| hd domain-containing protein | SAMN06265376_10145 | Not Available | Negative | 52225 - 52815 | 22864.7 |
| pap2 superfamily protein | SAMN06265376_10146 | Not Available | Negative | 52819 - 53550 | 27323.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

