Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Dokdonia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Dokdonia |
| Species | Dokdonia pacifica |
| Strain | strain DSM 25597 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Leptonotus elevatus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1822749 bp
Thymine Count
1814606 bp
Guanine Count
931531 bp
Cytosine Count
951057 bp
Genome Length
5520745 bp
Protein-coding Genes
4863 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pap2 superfamily protein | SAMN06265376_101306 | Not Available | Positive | 338710 - 340101 | 52100.4 |
| effector-binding domain-containing protein | SAMN06265376_101307 | Not Available | Positive | 340108 - 340998 | 34274.2 |
| pentapeptide repeat-containing protein | SAMN06265376_101308 | Not Available | Positive | 341005 - 341574 | 21268.1 |
| hypothetical protein | SAMN06265376_101309 | Not Available | Positive | 341754 - 341945 | 6267.42 |
| leucine rich repeat-containing protein | SAMN06265376_101310 | Not Available | Negative | 342098 - 342592 | 19032.0 |
| hypothetical protein | SAMN06265376_101311 | Not Available | Negative | 342866 - 343228 | 13576.6 |
| ketosteroid isomerase homolog | SAMN06265376_101312 | Not Available | Negative | 343325 - 343696 | 13850.5 |
| hypothetical protein | SAMN06265376_101313 | Not Available | Negative | 343858 - 344217 | 13855.8 |
| hypothetical protein | SAMN06265376_101314 | Not Available | Negative | 344580 - 345767 | 45016.0 |
| phosphatidylserine decarboxylase | SAMN06265376_101315 | Not Available | Positive | 346234 - 347511 | 48134.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

