Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Dokdonia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Dokdonia |
| Species | Dokdonia pacifica |
| Strain | strain DSM 25597 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Leptonotus elevatus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1822749 bp
Thymine Count
1814606 bp
Guanine Count
931531 bp
Cytosine Count
951057 bp
Genome Length
5520745 bp
Protein-coding Genes
4863 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06265376_101266 | Not Available | Positive | 283169 - 286477 | 127396.0 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN06265376_101267 | Not Available | Positive | 286479 - 287144 | 26122.8 |
| thioredoxin 1 | SAMN06265376_101268 | Not Available | Negative | 287152 - 287451 | 11171.5 |
| hypothetical protein | SAMN06265376_101269 | Not Available | Negative | 287518 - 288744 | 46628.3 |
| glycerate kinase | SAMN06265376_101270 | Not Available | Negative | 288922 - 290049 | 39760.5 |
| transporter, sss family | SAMN06265376_101271 | Not Available | Negative | 290060 - 291664 | 59278.8 |
| trehalase | SAMN06265376_101272 | Not Available | Negative | 291831 - 293141 | 50577.6 |
| transcriptional regulator, laci family | SAMN06265376_101273 | Not Available | Positive | 293320 - 294345 | 37979.0 |
| abc-type fe3+/spermidine/putrescine transport systems, atpase components | SAMN06265376_101274 | Not Available | Positive | 294427 - 295386 | 36474.0 |
| methyltransferase domain-containing protein | SAMN06265376_101275 | Not Available | Negative | 295363 - 296037 | 25684.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

