Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Dokdonia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Dokdonia |
| Species | Dokdonia pacifica |
| Strain | strain DSM 25597 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Leptonotus elevatus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1822749 bp
Thymine Count
1814606 bp
Guanine Count
931531 bp
Cytosine Count
951057 bp
Genome Length
5520745 bp
Protein-coding Genes
4863 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxine 5'-phosphate synthase | SAMN06265376_101196 | Not Available | Negative | 201303 - 202016 | 26451.5 |
| hypothetical protein | SAMN06265376_101197 | Not Available | Positive | 202096 - 202752 | 25176.4 |
| nad+ kinase | SAMN06265376_101198 | Not Available | Positive | 202756 - 203640 | 32719.4 |
| hypothetical protein | SAMN06265376_101199 | Not Available | Positive | 203827 - 204480 | 24454.5 |
| undecaprenyl diphosphate synthase | SAMN06265376_101200 | Not Available | Positive | 204470 - 205228 | 29285.2 |
| beta-barrel assembly machine subunit bama | SAMN06265376_101201 | Not Available | Positive | 205245 - 207824 | 96762.8 |
| periplasmic chaperone for outer membrane proteins skp | SAMN06265376_101202 | Not Available | Positive | 207788 - 208894 | 42661.9 |
| periplasmic chaperone for outer membrane proteins skp | SAMN06265376_101203 | Not Available | Positive | 208933 - 209448 | 19209.2 |
| glutamate racemase | SAMN06265376_101204 | Not Available | Positive | 209531 - 210349 | 30151.8 |
| two component transcriptional regulator, lyttr family | SAMN06265376_101205 | Not Available | Negative | 210353 - 211090 | 27645.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

