Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Dokdonia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Dokdonia |
| Species | Dokdonia pacifica |
| Strain | strain DSM 25597 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Leptonotus elevatus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1822749 bp
Thymine Count
1814606 bp
Guanine Count
931531 bp
Cytosine Count
951057 bp
Genome Length
5520745 bp
Protein-coding Genes
4863 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gh3 auxin-responsive promoter | SAMN06265376_101187 | Not Available | Positive | 190221 - 191735 | 57879.8 |
| wd40-like beta propeller repeat | SAMN06265376_101188 | Not Available | Positive | 191979 - 193589 | 59929.1 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN06265376_101189 | Not Available | Negative | 193675 - 194907 | 45731.6 |
| atp-dependent clp protease, protease subunit | SAMN06265376_101190 | Not Available | Negative | 194966 - 195640 | 24973.3 |
| trigger factor | SAMN06265376_101191 | Not Available | Negative | 195730 - 197052 | 50740.3 |
| putative membrane protein | SAMN06265376_101192 | Not Available | Negative | 197109 - 197474 | 13704.8 |
| hypothetical protein | SAMN06265376_101193 | Not Available | Negative | 197565 - 199109 | 53390.3 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 200165 - 200256 | 18.01 |
| long-chain fatty acid transport protein | SAMN06265376_101194 | Not Available | Negative | 199123 - 200406 | 46935.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN06265376_101195 | Not Available | Negative | 200536 - 201303 | 28948.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

