Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Dokdonia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Dokdonia |
| Species | Dokdonia pacifica |
| Strain | strain DSM 25597 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Leptonotus elevatus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1822749 bp
Thymine Count
1814606 bp
Guanine Count
931531 bp
Cytosine Count
951057 bp
Genome Length
5520745 bp
Protein-coding Genes
4863 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted phospholipase, patatin/cpla2 family | SAMN06265376_101177 | Not Available | Negative | 180048 - 180953 | 34107.8 |
| tetratricopeptide repeat-containing protein | SAMN06265376_101178 | Not Available | Negative | 181038 - 181490 | 17216.9 |
| hypothetical protein | SAMN06265376_101179 | Not Available | Negative | 181533 - 182156 | 23100.9 |
| carboxypepd_reg-like domain-containing protein | SAMN06265376_101180 | Not Available | Negative | 182255 - 185035 | 103947.0 |
| gldm n-terminal domain-containing protein | SAMN06265376_101181 | Not Available | Negative | 185153 - 185752 | 22728.1 |
| gtp-binding protein | SAMN06265376_101182 | Not Available | Negative | 185779 - 187083 | 49436.3 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN06265376_101183 | Not Available | Positive | 187205 - 187819 | 22576.8 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN06265376_101184 | Not Available | Positive | 187926 - 188543 | 22439.2 |
| transcriptional regulator, tetr family | SAMN06265376_101185 | Not Available | Positive | 188729 - 189301 | 21961.5 |
| protein of unknown function | SAMN06265376_101186 | Not Available | Negative | 189331 - 190125 | 30778.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

